Pathogen Genomics
Pathogen Genomics: From Research to Implementation - July 30, 2015
Real-time digital pathogen surveillance — the time is now
Gardy J et al. Genome Biology, July 30, 2015
Gardy J et al. Genome Biology, July 30, 2015
Genomic technologies speed pathogen detection
Stephenson J , JAMA, July 21, 2015
Stephenson J , JAMA, July 21, 2015
Pathogen genomics into practice
Luheshi L, et al. PHG Foundation 2015 July 8
Luheshi L, et al. PHG Foundation 2015 July 8
An integrated strategy for implementing infectious disease genomics, by Laura Blackburn, PHG Foundation, Jul 9
by Laura Blackburn, PHG Foundation, Jul 9Pathogen genomics into practice: from potential to reality, by Sobia Raza, PHG Foundation, Jul 9
by Sobia Raza, PHG Foundation, Jul 9What was old is new again: using the host response to diagnose infectious disease.
Ko ER et al. Expert Rev. Mol. Diagn. 2015 Jul 4. 1-16
Ko ER et al. Expert Rev. Mol. Diagn. 2015 Jul 4. 1-16
The role of pathogen genomics in assessing disease transmission.
Sintchenko V et al. BMJ 2015 h1314
Sintchenko V et al. BMJ 2015 h1314
A microbiological revolution meets an ancient disease: improving the management of tuberculosis with genomics.
Wlodarska M et al. Clin. Microbiol. Rev. 2015 Apr (2) 523-39
Wlodarska M et al. Clin. Microbiol. Rev. 2015 Apr (2) 523-39
The application of genomics to tracing bacterial pathogen transmission.
Croucher NJ et al. Curr. Opin. Microbiol. 2015 Feb 62-7
Croucher NJ et al. Curr. Opin. Microbiol. 2015 Feb 62-7
Molecular epidemiology and genomics of group A Streptococcus.
Bessen DE et al. Infect. Genet. Evol. 2015 Jul 393-418
Bessen DE et al. Infect. Genet. Evol. 2015 Jul 393-418
Epidemiologic data and pathogen genome sequences: a powerful synergy for public health.
Grad YH et al. Genome Biol. 2014 (11) 538
Grad YH et al. Genome Biol. 2014 (11) 538
Genomics of Infectious Diseases: Progress and Challenges - November 26, 2014
Microbial sequencing to improve individual and population health
Peacock SJ, Weinstock CM. Genome Medicine 2014, 6:103.
Peacock SJ, Weinstock CM. Genome Medicine 2014, 6:103.
Stopping outbreaks with real-time genomic epidemiology
Tang P, Gardy JL. Genome Medicine 2014, 6:104.
Tang P, Gardy JL. Genome Medicine 2014, 6:104.
Epidemiologic data and pathogen genome sequences: a powerful synergy for public health
Grad Y, Lipsitch M. Genome Biology 2014, 15:538.
Grad Y, Lipsitch M. Genome Biology 2014, 15:538.
Genomic analysis of emerging pathogens: methods, application and future trends
Lucy M Li, et al. Genome Biology, November 2014
Lucy M Li, et al. Genome Biology, November 2014
Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses in clinical and biological samples
Christian B Matranga et al. Genome Biology, November 2014
Christian B Matranga et al. Genome Biology, November 2014
Translating genomics research into control of tuberculosis: lessons learned and future prospects
Warner DF, Mizrahi V. Genome Biology 2014, 15:514.
Warner DF, Mizrahi V. Genome Biology 2014, 15:514.
Empowering African genomics for infectious disease control
Folarin OA, et al. Genome Biology 2014, 15:515.
Folarin OA, et al. Genome Biology 2014, 15:515.
Genomics and infectious disease: a call to identify the ethical, legal and social implications for public health and clinical practice
Geller G, et al. Genome Medicine 2014, 6:106.
Geller G, et al. Genome Medicine 2014, 6:106.
Pathogen Genome Sequencing: Public Health Applications - October 22, 2014
CDC Advanced Molecular Detection Initiative: Imagine doing a 10,000-piece jigsaw puzzle in the time it takes to finish a 100-piece puzzle. Apply that to infectious disease control, and that’s AMD at work. Now imagine putting together that 10,000-piece puzzle when key pieces are missing, disease is spreading, and people are dying. AMD gives CDC scientists the “key pieces” they need to protect people from ever-changing infectious disease threats
Genomic polish for shoe-leather epidemiology
Steven Y. C. Tong. Nature Reviews Microbiology 11, 8 (2013)
Steven Y. C. Tong. Nature Reviews Microbiology 11, 8 (2013)
In Snow's footsteps: Commentary on shoe-leather and applied epidemiology
Denise Koo and Stephen B. Thacker. Epidemiologic Reviews (2010)
Denise Koo and Stephen B. Thacker. Epidemiologic Reviews (2010)
Sherlock genomes — viral investigator
Sarah E. Smith & Rachael S. Wash Nature Reviews Microbiology 11, 150 (2013)
Sarah E. Smith & Rachael S. Wash Nature Reviews Microbiology 11, 150 (2013)
High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity.
Nature Reviews Microbiology10, 599-606 (2012)
Nature Reviews Microbiology10, 599-606 (2012)
Transforming clinical microbiology with bacterial genome sequencing
Nature Reviews Genetics13, 601-612 (2012)
Nature Reviews Genetics13, 601-612 (2012)
Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions
W. Florian Fricke & David A. Rasko. Nature Reviews Genetics 15, 49-55 (2014)
W. Florian Fricke & David A. Rasko. Nature Reviews Genetics 15, 49-55 (2014)
Pathogen Genomics: Utility in Healthcare and Public Health - June 5, 2014
ePathGen - a new e-learning package in pathogen genomics
Eurosurveillance, Volume 19, Issue 21, 29 May 2014
Eurosurveillance, Volume 19, Issue 21, 29 May 2014
CDC information: Pathogen genomics has changed the landscape of the fight against infectious diseases
FDA Consumer Information: Whole Genome Sequencing Helps Identify Dangerous Bacteria
GenomeTrakr helps FDA identify dangerous bacteria, Health News Digest, Jun 2
Health News Digest, Jun 2Beating the bugs: The pathogen genomics revolution, Leila Lehushi, PHG Foundation, May 2014
Leila Lehushi, PHG Foundation, May 2014 Health care: Bring microbial sequencing to hospitals, Sharon Peacock Nature News, May 22
Sharon Peacock Nature News, May 22
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